RNAs from 16-month-old Infected Plant Roots - SRA

SRX952211: RNAs from 16-month-old Infected Plant Roots
1 LS454 (454 GS FLX Titanium) run: 455,550 spots, 254.7M bases, 555.2Mb downloads

Design: RNA from roots of 4 plants infected for 7 months with Phytophthora cinnamomi. RNA was pooled. RNA was extracted using Plant RNeasy kits (QIAGEN). Non-normalized library. cDNA was produced from total RNA using the SMART methodology.

Submitted by: Universidade do Algarve

Study: Quercus suber Transcriptome or Gene expression

PRJNA277884 • SRP056081 • All experiments • All runs

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The transcriptome analysis of Q. suber directed to genes related to biotic stress caused by Phytophthora cinnamomi infection, the main biotic contributor to the decline disease aims at the characterization of target and regulatory genes that are responsive to the infectious process leading to the understanding of the genetic mechanisms underlying Quercus defence against P. cinnamomi and is an essential prerequisite for the implementation of future control strategies.

Sample: Roots from 16-month-old plants infected with Phytophthora cinnamomi

SAMN03398613 • SRS872382 • All experiments • All runs

Organism: Quercus suber

Library:

Name: L-RIE

Instrument: 454 GS FLX Titanium

Strategy: EST

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Spot descriptor:

5 forward

Runs: 1 run, 455,550 spots, 254.7M bases, 555.2Mb

Run	# of Spots	# of Bases	Size	Published
SRR1924200	455,550	254.7M	555.2Mb	2016-03-11

ID:: 1352778

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